JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF727_chr7_64040434_64090339	0/0	g0293	1	0	0	1	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0294	1	0	0	1	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0295	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0296	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0297	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0298	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0299	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0300	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0301	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0302	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0303	1	1	0	0	0	0	ZNF727	chr7	64040434	64090339
ZNF727_chr7_64040434_64090339	0/0	g0304	1	0	0	1	0	0	ZNF727	chr7	64040434	64090339
ZNF728_chr19_22969883_23008176	0/1	g0001	21	0	4	13	0	3	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0002	14	4	3	7	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0003	11	3	2	4	1	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0004	8	0	3	3	0	2	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0005	7	0	0	7	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0006	7	0	0	7	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0007	6	6	0	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0008	4	0	4	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0009	4	1	0	0	1	2	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0010	4	0	0	4	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0011	4	4	0	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0012	4	2	0	1	0	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0013	4	4	0	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0014	4	0	2	0	1	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0015	3	0	1	1	0	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0016	3	0	0	2	0	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0017	3	0	0	1	1	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0018	3	3	0	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0019	3	0	0	0	1	2	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0020	3	0	0	3	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0021	3	0	0	2	0	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0022	3	1	0	2	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0023	3	3	0	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0024	2	0	1	0	1	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0025	2	0	2	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0026	2	2	0	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0027	2	0	0	2	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0028	2	0	0	2	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0029	2	0	1	0	1	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0030	2	0	1	0	0	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0031	2	0	0	2	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0032	2	1	0	0	0	1	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0033	2	0	0	2	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0034	2	0	2	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0035	2	0	0	2	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0036	2	0	2	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0037	2	0	2	0	0	0	ZNF728	chr19	22969883	23008176
ZNF728_chr19_22969883_23008176	0/0	g0038	2	0	0	2	0	0	ZNF728	chr19	22969883	23008176