JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF729_chr19_22281441_22322176	0/0	g0290	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0291	1	0	0	0	0	1	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0292	1	0	1	0	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0293	1	0	1	0	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0294	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0295	1	0	0	0	0	1	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0296	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0297	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0298	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0299	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0300	1	0	1	0	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0301	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0302	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0303	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0304	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0305	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0306	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0307	1	0	1	0	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0308	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0309	1	0	0	1	0	0	ZNF729	chr19	22281441	22322176
ZNF729_chr19_22281441_22322176	0/0	g0310	1	0	1	0	0	0	ZNF729	chr19	22281441	22322176
ZNF730_chr19_23112025_23152221	0/0	g0001	11	1	4	3	0	3	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0002	5	0	0	5	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0003	5	0	2	3	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0004	4	0	0	4	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0005	4	0	0	4	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0006	4	0	2	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0007	3	0	2	0	1	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0008	3	2	1	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0009	3	0	0	3	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0010	3	0	1	1	0	1	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/1	g0011	2	0	1	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0012	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0013	2	0	1	0	1	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0014	2	2	0	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0015	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0016	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0017	2	0	2	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0018	2	2	0	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0019	2	1	0	1	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0020	2	0	1	1	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0021	2	1	1	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0022	2	2	0	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0023	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0024	2	0	1	1	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0025	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0026	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0027	2	1	1	0	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0028	2	0	0	2	0	0	ZNF730	chr19	23112025	23152221
ZNF730_chr19_23112025_23152221	0/0	g0029	2	1	1	0	0	0	ZNF730	chr19	23112025	23152221