JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF732_chr4_265675_310474	0/0	g0292	1	0	1	0	0	0	ZNF732	chr4	265675	310474
ZNF732_chr4_265675_310474	0/0	g0293	1	0	1	0	0	0	ZNF732	chr4	265675	310474
ZNF732_chr4_265675_310474	0/0	g0294	1	0	0	1	0	0	ZNF732	chr4	265675	310474
ZNF732_chr4_265675_310474	0/0	g0295	1	0	0	0	0	1	ZNF732	chr4	265675	310474
ZNF732_chr4_265675_310474	0/0	g0296	1	0	0	1	0	0	ZNF732	chr4	265675	310474
ZNF732_chr4_265675_310474	0/0	g0297	1	0	0	1	0	0	ZNF732	chr4	265675	310474
ZNF732_chr4_265675_310474	0/0	g0298	1	0	1	0	0	0	ZNF732	chr4	265675	310474
ZNF735_chr7_64202203_64225290	0/0	g0001	38	1	14	19	1	3	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0002	30	0	3	23	0	4	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0003	20	1	3	12	1	3	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0004	16	0	2	14	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0005	10	0	0	9	0	1	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0006	10	0	0	8	0	2	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0007	9	1	1	5	0	2	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0008	8	0	0	8	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0009	8	7	1	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0010	8	1	3	0	3	1	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0011	8	0	0	8	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0012	7	2	0	5	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0013	6	0	6	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0014	6	0	2	0	0	4	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0015	6	0	4	0	1	1	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0016	5	5	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0017	5	5	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0018	5	3	0	0	0	2	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0019	5	0	2	3	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0020	5	0	0	5	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0021	4	4	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0022	4	0	0	4	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0023	4	4	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0024	4	0	0	4	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0025	4	0	0	4	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0026	3	3	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0027	3	0	0	2	0	1	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0028	3	0	0	3	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0029	3	3	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0030	3	0	0	3	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0031	3	1	0	2	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0032	3	0	0	3	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0033	3	0	2	1	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0034	3	0	2	0	1	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0035	3	0	0	3	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0036	3	3	0	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0037	3	2	0	0	0	1	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0038	3	0	1	2	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0039	3	0	0	3	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0040	2	0	1	1	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0041	2	0	0	2	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0042	2	0	2	0	0	0	ZNF735	chr7	64202203	64225290
ZNF735_chr7_64202203_64225290	0/0	g0043	2	0	0	0	2	0	ZNF735	chr7	64202203	64225290