JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF746_chr7_149467794_149502809	0/0	g0269	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0270	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0271	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0272	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0273	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0274	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0275	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0276	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0277	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0278	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0279	1	1	0	0	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0280	1	1	0	0	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0281	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0282	1	1	0	0	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0283	1	0	1	0	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0284	1	1	0	0	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0285	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF746_chr7_149467794_149502809	0/0	g0286	1	0	0	1	0	0	ZNF746	chr7	149467794	149502809
ZNF747_chr16_30525367_30539858	1/0	g0001	185	16	41	96	10	21	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/1	g0002	54	24	18	1	7	3	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0003	31	1	15	10	1	4	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0004	14	14	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0005	12	12	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0006	10	9	0	0	0	1	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0007	4	0	0	0	0	4	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0008	4	3	1	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0009	3	3	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0010	3	3	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0011	2	2	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0012	2	0	0	2	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0013	2	0	2	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0014	2	0	0	1	0	1	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0015	2	0	2	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0016	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0017	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0018	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0019	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0020	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0021	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0022	1	0	0	0	0	1	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0023	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0024	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0025	1	1	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0026	1	0	0	1	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0027	1	1	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0028	1	1	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0029	1	1	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0030	1	0	1	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0031	1	1	0	0	0	0	ZNF747	chr16	30525367	30539858
ZNF747_chr16_30525367_30539858	0/0	g0032	1	1	0	0	0	0	ZNF747	chr16	30525367	30539858