JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF750_chr17_82824434_82845022	0/0	g0101	1	0	0	1	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0102	1	0	0	0	0	1	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0103	1	0	0	1	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	1/0	g0104	1	0	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0105	1	0	0	0	0	1	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0106	1	1	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0107	1	1	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0108	1	1	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0109	1	1	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0110	1	1	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	g0111	1	1	0	0	0	0	ZNF750	chr17	82824434	82845022
ZNF75A_chr16_3300497_3323851	0/0	g0001	63	5	20	28	3	7	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0002	33	1	5	15	2	10	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/1	g0003	24	1	3	14	1	4	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0004	20	2	6	12	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0005	19	0	0	19	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0006	16	1	8	3	1	3	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0007	15	0	0	15	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0008	10	9	1	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0009	8	8	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0010	7	7	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0011	6	6	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0012	5	0	2	0	2	1	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0013	5	5	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0014	4	4	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0015	4	0	0	3	0	1	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0016	4	0	4	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0017	3	0	0	3	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0018	3	0	0	2	0	1	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0019	3	0	2	1	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0020	3	1	0	2	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0021	3	0	0	3	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0022	2	2	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0023	2	1	1	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0024	2	2	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0025	2	0	0	2	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0026	2	0	2	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0027	2	2	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0028	2	1	1	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0029	2	2	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0030	2	2	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0031	2	2	0	0	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0032	2	0	0	1	0	1	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0033	2	0	0	2	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0034	2	0	0	2	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0035	2	0	0	1	0	1	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0036	2	0	0	2	0	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0037	2	0	0	0	0	2	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0038	2	0	1	0	1	0	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	g0039	2	0	0	0	0	2	ZNF75A	chr16	3300497	3323851