JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF765_chr19_53390149_53417009	0/0	g0369	1	0	1	0	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0370	1	0	1	0	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	1/0	g0371	1	0	0	0	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0372	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0373	1	0	1	0	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0374	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0375	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0376	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0377	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0378	1	1	0	0	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0379	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0380	1	0	0	0	1	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0381	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0382	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0383	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0384	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0385	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0386	1	0	0	1	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0387	1	1	0	0	0	0	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	g0388	1	0	1	0	0	0	ZNF765	chr19	53390149	53417009
ZNF766_chr19_52264587_52301046	0/0	g0001	10	0	0	9	0	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0002	9	1	4	0	2	2	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0003	8	5	0	2	0	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0004	6	0	3	0	2	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0005	6	0	2	4	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0006	6	0	2	4	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0007	5	0	1	1	1	2	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0008	5	0	0	5	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0009	5	3	2	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0010	5	1	3	0	0	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0011	5	0	0	5	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0012	4	0	3	0	0	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0013	4	0	3	0	1	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0014	4	4	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0015	3	0	0	3	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0016	3	2	1	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0017	3	0	1	0	0	2	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0018	3	0	3	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0019	3	0	0	3	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0020	3	0	0	3	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0021	3	0	0	3	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0022	3	0	0	3	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0023	3	3	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0024	3	0	3	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0025	3	3	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0026	2	0	0	2	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0027	2	0	0	2	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0028	2	0	0	2	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0029	2	0	0	2	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0030	2	0	1	0	1	0	ZNF766	chr19	52264587	52301046