JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF766_chr19_52264587_52301046	0/0	g0281	1	0	0	0	0	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0282	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0283	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0284	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0285	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0286	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0287	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0288	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0289	1	0	1	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0290	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0291	1	0	1	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0292	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0293	1	0	0	0	0	1	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0294	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0295	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0296	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0297	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF766_chr19_52264587_52301046	0/0	g0298	1	1	0	0	0	0	ZNF766	chr19	52264587	52301046
ZNF768_chr16_30519004_30531566	1/0	g0001	135	3	40	79	7	5	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0002	104	33	14	29	4	24	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/1	g0003	81	47	20	1	7	5	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0004	7	7	0	0	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0005	4	0	0	4	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0006	3	0	0	0	0	3	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0007	1	1	0	0	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0008	1	0	0	0	0	1	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0009	1	0	1	0	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0010	1	0	0	1	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0011	1	0	1	0	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0012	1	0	0	1	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0013	1	0	0	1	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0014	1	1	0	0	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0015	1	0	0	1	0	0	ZNF768	chr16	30519004	30531566
ZNF768_chr16_30519004_30531566	0/0	g0016	1	0	0	1	0	0	ZNF768	chr16	30519004	30531566
ZNF76_chr6_35254735_35300985	0/0	g0001	7	2	1	3	1	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0002	5	5	0	0	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0003	5	1	2	2	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0004	4	0	0	3	0	1	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0005	4	1	0	2	0	1	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0006	3	0	1	2	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0007	3	3	0	0	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0008	3	1	1	0	0	1	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0009	3	2	1	0	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0010	2	2	0	0	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0011	2	2	0	0	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0012	2	0	0	2	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0013	2	0	0	2	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0014	2	0	1	1	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0015	2	1	1	0	0	0	ZNF76	chr6	35254735	35300985
ZNF76_chr6_35254735_35300985	0/0	g0016	2	0	1	0	0	1	ZNF76	chr6	35254735	35300985