JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF770_chr15_34973341_34993287	0/0	g0051	1	1	0	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0052	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0053	1	1	0	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0054	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0055	1	1	0	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0056	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0057	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0058	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0059	1	0	1	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0060	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0061	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0062	1	0	1	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0063	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0064	1	0	1	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0065	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0066	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0067	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0068	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0069	1	1	0	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0070	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0071	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0072	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0073	1	0	1	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0074	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0075	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0076	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0077	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0078	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0079	1	0	1	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0080	1	0	0	1	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0081	1	0	0	0	1	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0082	1	0	0	0	1	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0083	1	1	0	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0084	1	1	0	0	0	0	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0085	1	0	0	0	0	1	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	g0086	1	0	1	0	0	0	ZNF770	chr15	34973341	34993287
ZNF771_chr16_30402606_30424414	0/0	g0001	13	1	3	8	1	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0002	12	0	3	6	0	3	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0003	11	0	1	8	0	2	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0004	10	0	2	4	0	4	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0005	7	0	0	4	2	1	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0006	7	0	0	3	1	3	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0007	6	0	2	2	1	1	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0008	5	0	2	3	0	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0009	5	0	0	5	0	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0010	5	0	3	2	0	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0011	4	0	2	2	0	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0012	4	0	2	0	2	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0013	4	2	2	0	0	0	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	g0014	4	0	0	0	0	4	ZNF771	chr16	30402606	30424414