JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF780B_chr19_40023260_40061231	0/0	g0154	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0155	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0156	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0157	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0158	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0159	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0160	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0161	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0162	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0163	1	0	1	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0164	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0165	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0166	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0167	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0168	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0169	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0170	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0171	1	0	1	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0172	1	0	1	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0173	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0174	1	0	0	0	0	1	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0175	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0176	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0177	1	0	1	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0178	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0179	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0180	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0181	1	1	0	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0182	1	0	0	1	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0183	1	0	1	0	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0184	1	0	0	1	0	0	ZNF780B	chr19	40023260	40061231
ZNF780B_chr19_40023260_40061231	0/0	g0185	1	0	0	1	0	0	ZNF780B	chr19	40023260	40061231
ZNF782_chr9_96811269_96859514	0/0	g0001	27	1	3	17	0	6	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0002	16	0	0	16	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0003	8	0	1	3	2	2	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0004	7	0	0	7	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0005	6	6	0	0	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0006	5	5	0	0	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0007	5	0	4	0	1	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0008	4	0	0	4	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0009	4	0	0	4	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0010	4	0	0	4	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0011	4	0	2	0	1	1	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0012	4	3	1	0	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0013	4	0	0	4	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0014	4	0	0	4	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0015	4	4	0	0	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0016	3	0	0	3	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0017	3	0	0	3	0	0	ZNF782	chr9	96811269	96859514
ZNF782_chr9_96811269_96859514	0/0	g0018	3	2	1	0	0	0	ZNF782	chr9	96811269	96859514