JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF783_chr7_149257196_149289988	0/0	g0238	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0239	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0240	1	0	1	0	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0241	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0242	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0243	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0244	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0245	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0246	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0247	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0248	1	0	1	0	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0249	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0250	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0251	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0252	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0253	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0254	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0255	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0256	1	0	1	0	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0257	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0258	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0259	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0260	1	0	0	1	0	0	ZNF783	chr7	149257196	149289988
ZNF783_chr7_149257196_149289988	0/0	g0261	1	0	0	0	0	1	ZNF783	chr7	149257196	149289988
ZNF784_chr19_55615741_55629566	1/1	g0001	224	37	52	94	10	29	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0002	74	10	20	33	1	10	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0003	14	6	4	0	3	1	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0004	8	8	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0005	6	5	1	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0006	6	6	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0007	6	0	0	6	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0008	5	5	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0009	4	4	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0010	4	1	3	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0011	3	0	0	3	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0012	3	0	2	0	0	1	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0013	3	1	0	2	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0014	2	2	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0015	2	2	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0016	2	2	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0017	2	2	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0018	2	0	0	2	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0019	1	1	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0020	1	0	1	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0021	1	1	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0022	1	0	0	1	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0023	1	0	0	0	0	1	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0024	1	1	0	0	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0025	1	0	0	1	0	0	ZNF784	chr19	55615741	55629566
ZNF784_chr19_55615741_55629566	0/0	g0026	1	0	0	1	0	0	ZNF784	chr19	55615741	55629566