JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF787_chr19_56082366_56126295	0/0	g0349	1	0	1	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0350	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0351	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0352	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0353	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0354	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0355	1	0	1	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0356	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0357	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0358	1	0	1	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0359	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0360	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0361	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0362	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0363	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0364	1	0	1	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	1/0	g0365	1	0	0	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0366	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0367	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0368	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0369	1	0	1	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0370	1	0	1	0	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0371	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0372	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0373	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF787_chr19_56082366_56126295	0/0	g0374	1	0	0	1	0	0	ZNF787	chr19	56082366	56126295
ZNF789_chr7_99467890_99492605	1/1	g0001	83	3	16	42	3	17	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0002	62	4	5	42	1	10	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0003	17	11	1	1	2	2	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0004	11	11	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0005	7	2	4	0	1	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0006	6	0	0	4	0	2	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0007	5	4	1	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0008	5	5	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0009	5	0	1	3	1	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0010	4	0	3	0	1	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0011	4	4	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0012	4	3	1	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0013	3	0	2	0	0	1	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0014	3	1	2	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0015	3	0	2	0	1	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0016	3	0	0	3	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0017	3	0	0	3	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0018	3	3	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0019	3	0	3	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0020	2	2	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0021	2	2	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0022	2	2	0	0	0	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0023	2	0	0	0	2	0	ZNF789	chr7	99467890	99492605
ZNF789_chr7_99467890_99492605	0/0	g0024	2	0	2	0	0	0	ZNF789	chr7	99467890	99492605