JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF791_chr19_12605920_12638834	0/0	g0351	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0352	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0353	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0354	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0355	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0356	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0357	1	0	1	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0358	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0359	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0360	1	0	1	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0361	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0362	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0363	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0364	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0365	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF791_chr19_12605920_12638834	0/0	g0366	1	1	0	0	0	0	ZNF791	chr19	12605920	12638834
ZNF792_chr19_34951354_34969229	1/0	g0001	126	12	32	60	9	12	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0002	76	27	11	32	2	4	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0003	47	3	7	32	1	4	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0004	43	1	3	34	2	3	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0005	12	0	4	6	1	1	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0006	7	0	0	7	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0007	6	6	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0008	6	0	5	0	1	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0009	6	5	0	1	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0010	5	5	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0011	5	0	0	0	0	5	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0012	5	5	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0013	4	0	4	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0014	4	4	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0015	4	0	0	4	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0016	3	0	0	3	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0017	3	3	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0018	3	0	0	3	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0019	3	0	0	0	0	3	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0020	3	3	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0021	2	0	0	2	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0022	2	2	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0023	2	0	0	2	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0024	2	0	1	0	1	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0025	2	0	0	0	0	2	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/1	g0026	2	0	1	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0027	2	0	0	2	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0028	2	0	1	0	0	1	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0029	2	2	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0030	2	0	0	0	0	2	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0031	2	0	2	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0032	2	2	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0033	2	2	0	0	0	0	ZNF792	chr19	34951354	34969229
ZNF792_chr19_34951354_34969229	0/0	g0034	2	2	0	0	0	0	ZNF792	chr19	34951354	34969229