JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF79_chr9_127419382_127450372	0/0	g0170	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0171	1	0	0	0	1	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0172	1	0	0	0	0	1	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0173	1	0	1	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0174	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0175	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0176	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0177	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0178	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0179	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0180	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0181	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0182	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0183	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0184	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0185	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0186	1	0	0	1	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0187	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0188	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0189	1	0	1	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0190	1	0	1	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0191	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0192	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0193	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0194	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF79_chr9_127419382_127450372	0/0	g0195	1	1	0	0	0	0	ZNF79	chr9	127419382	127450372
ZNF7_chr8_144822560_144848772	0/1	g0001	37	0	5	17	0	14	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0002	37	0	5	32	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0003	24	0	10	11	1	2	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0004	23	0	8	12	1	2	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0005	20	0	0	19	0	1	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0006	16	0	4	12	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0007	15	0	4	5	1	5	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0008	8	4	3	0	0	1	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0009	8	5	2	0	1	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0010	6	5	1	0	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0011	5	5	0	0	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0012	5	0	0	5	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0013	4	1	3	0	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0014	4	0	3	1	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0015	4	4	0	0	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0016	4	0	3	0	1	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0017	4	0	2	0	2	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0018	3	0	0	3	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0019	3	0	1	2	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0020	3	0	2	0	1	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0021	3	0	0	3	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0022	3	0	0	0	2	1	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0023	3	0	1	2	0	0	ZNF7	chr8	144822560	144848772
ZNF7_chr8_144822560_144848772	0/0	g0024	3	0	0	3	0	0	ZNF7	chr8	144822560	144848772