JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF813_chr19_53462733_53501255	0/0	g0350	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0351	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0352	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0353	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0354	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0355	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0356	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0357	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0358	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0359	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0360	1	0	1	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0361	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0362	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0363	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0364	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0365	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0366	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0367	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0368	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0369	1	0	1	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0370	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0371	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0372	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0373	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0374	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0375	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0376	1	0	0	0	0	1	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0377	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0378	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0379	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0380	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0381	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0382	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0383	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0384	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0385	1	1	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	1/0	g0386	1	0	0	0	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0387	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0388	1	0	0	1	0	0	ZNF813	chr19	53462733	53501255
ZNF813_chr19_53462733_53501255	0/0	g0389	1	0	1	0	0	0	ZNF813	chr19	53462733	53501255
ZNF814_chr19_57864381_57894037	0/0	g0001	45	1	10	29	1	4	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0002	27	0	8	15	0	4	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0003	8	0	1	4	0	3	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/1	g0004	8	0	4	2	1	0	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0005	7	7	0	0	0	0	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0006	7	0	4	1	1	1	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0007	7	0	0	7	0	0	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0008	6	0	2	3	0	1	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0009	6	0	0	6	0	0	ZNF814	chr19	57864381	57894037
ZNF814_chr19_57864381_57894037	0/0	g0010	5	0	0	4	0	1	ZNF814	chr19	57864381	57894037