JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C10orf105_chr10_71706701_71724778	0/0	g0040	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0041	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0042	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0043	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0044	1	1	0	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0045	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0046	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0047	1	1	0	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0048	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0049	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0050	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0051	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0052	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0053	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0054	1	0	0	0	0	1	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0055	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0056	1	1	0	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0057	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0058	1	1	0	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0059	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0060	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0061	1	0	0	1	0	0	C10orf105	chr10	71706701	71724778
C10orf105_chr10_71706701_71724778	0/0	g0062	1	0	1	0	0	0	C10orf105	chr10	71706701	71724778
C10orf120_chr10_122692709_122704846	0/0	g0001	60	11	12	28	5	4	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	1/0	g0002	59	11	10	28	2	7	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0003	45	4	7	28	0	6	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0004	44	6	6	27	1	4	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0005	31	0	5	24	0	2	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0006	23	2	8	12	0	1	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/1	g0007	18	4	2	7	1	3	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0008	17	6	4	6	0	1	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0009	15	0	0	15	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0010	12	5	2	2	3	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0011	9	5	1	2	0	1	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0012	9	3	3	3	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0013	8	6	2	0	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0014	8	0	5	0	1	2	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0015	8	3	1	0	0	4	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0016	8	0	4	2	1	1	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0017	6	0	0	6	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0018	6	0	0	6	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0019	5	0	3	0	0	2	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0020	4	4	0	0	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0021	4	4	0	0	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0022	4	0	1	1	0	2	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0023	3	0	0	2	0	1	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0024	3	1	0	2	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0025	2	2	0	0	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0026	2	2	0	0	0	0	C10orf120	chr10	122692709	122704846
C10orf120_chr10_122692709_122704846	0/0	g0027	2	0	0	0	0	2	C10orf120	chr10	122692709	122704846