JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF85_chr19_20918251_20955697	0/0	g0229	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0230	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0231	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0232	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0233	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0234	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0235	1	0	0	0	0	1	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0236	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0237	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0238	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0239	1	0	0	0	0	1	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0240	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0241	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0242	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0243	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0244	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0245	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0246	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0247	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0248	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0249	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0250	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0251	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0252	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0253	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0254	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0255	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0256	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0257	1	0	0	0	0	1	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0258	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0259	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0260	1	0	1	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0261	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0262	1	0	0	0	0	1	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0263	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0264	1	0	0	1	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0265	1	0	0	0	0	1	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0266	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF85_chr19_20918251_20955697	0/0	g0267	1	1	0	0	0	0	ZNF85	chr19	20918251	20955697
ZNF860_chr3_31976750_31996723	1/1	g0001	113	21	33	35	6	16	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0002	59	5	14	26	5	9	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0003	54	0	4	48	0	2	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0004	34	1	5	27	0	1	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0005	32	30	2	0	0	0	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0006	10	0	0	10	0	0	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0007	9	0	0	8	0	1	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0008	9	7	2	0	0	0	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0009	6	0	0	6	0	0	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0010	5	0	0	5	0	0	ZNF860	chr3	31976750	31996723
ZNF860_chr3_31976750_31996723	0/0	g0011	5	5	0	0	0	0	ZNF860	chr3	31976750	31996723