JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF880_chr19_52364923_52390795	0/0	g0255	1	0	1	0	0	0	ZNF880	chr19	52364923	52390795
ZNF880_chr19_52364923_52390795	0/0	g0256	1	0	0	0	0	1	ZNF880	chr19	52364923	52390795
ZNF880_chr19_52364923_52390795	0/0	g0257	1	0	0	1	0	0	ZNF880	chr19	52364923	52390795
ZNF880_chr19_52364923_52390795	0/0	g0258	1	0	0	0	0	1	ZNF880	chr19	52364923	52390795
ZNF880_chr19_52364923_52390795	0/0	g0259	1	0	0	1	0	0	ZNF880	chr19	52364923	52390795
ZNF880_chr19_52364923_52390795	0/0	g0260	1	0	1	0	0	0	ZNF880	chr19	52364923	52390795
ZNF883_chr9_112983129_113017192	0/0	g0001	25	3	4	15	1	2	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	1/0	g0002	19	4	3	8	0	3	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0003	18	1	3	9	3	2	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0004	18	0	1	17	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0005	14	0	2	10	0	2	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0006	13	0	0	13	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0007	13	2	1	6	0	4	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0008	9	6	3	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0009	7	0	0	4	0	3	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0010	7	0	6	0	1	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0011	6	3	3	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0012	6	0	1	5	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0013	5	3	0	0	0	2	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0014	5	0	1	3	1	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0015	5	0	3	2	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0016	4	0	1	3	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0017	4	0	2	0	1	1	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0018	4	4	0	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0019	4	0	0	4	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0020	4	4	0	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0021	4	4	0	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0022	4	3	1	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0023	3	1	2	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0024	3	0	3	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0025	3	0	2	0	0	1	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0026	3	0	0	3	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0027	3	0	3	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0028	3	0	0	3	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0029	3	3	0	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0030	3	3	0	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0031	3	0	0	3	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0032	3	0	0	3	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0033	2	0	0	0	0	2	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0034	2	2	0	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0035	2	0	2	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0036	2	0	1	1	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0037	2	0	2	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0038	2	0	2	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0039	2	1	1	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0040	2	1	1	0	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0041	2	0	0	2	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0042	2	0	0	2	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0043	2	0	0	2	0	0	ZNF883	chr9	112983129	113017192
ZNF883_chr9_112983129_113017192	0/0	g0044	2	1	1	0	0	0	ZNF883	chr9	112983129	113017192