JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF892_chr2_95202521_95228839	0/0	g0021	1	1	0	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0022	1	1	0	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0023	1	1	0	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0024	1	1	0	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0025	1	0	1	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0026	1	0	0	1	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0027	1	1	0	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0028	1	0	0	1	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0029	1	0	0	1	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0030	1	0	0	0	1	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0031	1	0	0	1	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0032	1	1	0	0	0	0	ZNF892	chr2	95202521	95228839
ZNF892_chr2_95202521_95228839	0/0	g0033	1	0	0	1	0	0	ZNF892	chr2	95202521	95228839
ZNF8_chr19_58273955_58307791	0/0	g0001	49	13	11	20	3	2	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0002	45	1	3	37	0	4	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0003	23	0	0	19	0	4	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0004	17	2	0	10	0	5	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0005	15	1	6	0	4	4	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/1	g0006	12	0	4	1	2	4	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0007	11	0	9	2	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0008	8	0	4	4	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0009	5	0	1	4	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0010	5	4	1	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0011	5	0	0	4	0	1	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0012	4	2	0	2	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0013	4	1	2	1	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0014	4	0	0	4	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0015	4	4	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0016	3	3	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0017	3	0	0	0	0	3	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0018	3	3	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0019	3	3	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0020	3	0	0	3	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0021	3	0	0	0	0	3	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0022	3	0	0	3	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0023	3	0	0	3	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0024	3	3	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0025	2	0	0	2	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0026	2	0	2	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0027	2	1	0	1	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0028	2	1	1	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0029	2	2	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0030	2	0	1	0	0	1	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0031	2	2	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0032	2	0	0	0	0	2	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0033	2	0	0	2	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0034	2	2	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0035	2	2	0	0	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0036	2	0	0	2	0	0	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	g0037	2	2	0	0	0	0	ZNF8	chr19	58273955	58307791