JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF91_chr19_23352696_23400471	0/0	g0320	1	0	0	0	0	1	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0321	1	0	1	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0322	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0323	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0324	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0325	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0326	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0327	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0328	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0329	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0330	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0331	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0332	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0333	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0334	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0335	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0336	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0337	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0338	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0339	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0340	1	0	0	1	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0341	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF91_chr19_23352696_23400471	0/0	g0342	1	1	0	0	0	0	ZNF91	chr19	23352696	23400471
ZNF92_chr7_65368855_65406136	0/0	g0001	54	5	12	30	1	6	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0002	47	4	1	35	2	5	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0003	44	1	9	31	0	3	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0004	21	0	1	19	0	1	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0005	16	1	7	0	4	4	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0006	14	0	3	11	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0007	10	8	2	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0008	10	9	1	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0009	6	0	1	1	1	3	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0010	6	0	0	6	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0011	6	6	0	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0012	4	0	3	0	0	1	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0013	4	4	0	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0014	4	0	4	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0015	4	0	0	4	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0016	3	0	0	3	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0017	3	0	0	3	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0018	3	0	3	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0019	3	0	2	0	0	1	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0020	3	0	3	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0021	3	3	0	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0022	3	3	0	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0023	3	3	0	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0024	3	0	1	2	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0025	3	3	0	0	0	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0026	3	0	2	0	1	0	ZNF92	chr7	65368855	65406136
ZNF92_chr7_65368855_65406136	0/0	g0027	2	1	1	0	0	0	ZNF92	chr7	65368855	65406136