JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C10orf71_chr10_49294170_49332492	0/0	g0217	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0218	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0219	1	0	0	0	0	1	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0220	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0221	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0222	1	0	0	0	0	1	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0223	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0224	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0225	1	0	1	0	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0226	1	0	0	0	1	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0227	1	0	1	0	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0228	1	0	1	0	0	0	C10orf71	chr10	49294170	49332492
C10orf71_chr10_49294170_49332492	0/0	g0229	1	0	0	1	0	0	C10orf71	chr10	49294170	49332492
C10orf82_chr10_116658696_116674966	0/0	g0001	41	4	20	6	5	6	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/1	g0002	32	2	10	10	4	5	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0003	28	3	0	24	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0004	17	0	0	17	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0005	16	1	2	13	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0006	15	0	5	8	1	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0007	13	1	7	4	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0008	13	0	0	13	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0009	10	0	0	10	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0010	10	0	0	10	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0011	9	0	0	9	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0012	7	1	4	2	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0013	7	1	1	4	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0014	7	0	0	6	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0015	6	1	3	0	1	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0016	5	0	0	5	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0017	5	1	2	0	1	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0018	4	1	2	0	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0019	4	0	0	4	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0020	4	0	0	4	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0021	4	3	1	0	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0022	4	0	0	0	1	3	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0023	4	3	1	0	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0024	4	0	0	3	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0025	4	0	1	2	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0026	4	0	0	0	1	3	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0027	4	0	0	3	0	1	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0028	4	0	0	4	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0029	3	0	0	3	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0030	3	3	0	0	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0031	3	2	0	1	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0032	3	2	1	0	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0033	3	0	0	3	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0034	3	0	0	3	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0035	3	3	0	0	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0036	3	0	0	3	0	0	C10orf82	chr10	116658696	116674966
C10orf82_chr10_116658696_116674966	0/0	g0037	3	0	0	3	0	0	C10orf82	chr10	116658696	116674966