JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C10orf90_chr10_126419997_126675693	0/0	g0204	1	1	0	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0205	1	0	1	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0206	1	0	1	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0207	1	0	0	0	0	1	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0208	1	0	1	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0209	1	0	1	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0210	1	0	0	1	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0211	1	0	0	1	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0212	1	0	0	0	0	1	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0213	1	0	0	1	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0214	1	0	0	0	0	1	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0215	1	0	0	0	0	1	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0216	1	0	1	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0217	1	0	1	0	0	0	C10orf90	chr10	126419997	126675693
C10orf90_chr10_126419997_126675693	0/0	g0218	1	0	0	1	0	0	C10orf90	chr10	126419997	126675693
C10orf95_chr10_102444837_102456543	1/1	g0001	234	35	49	115	10	23	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0002	149	33	23	70	3	20	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0003	31	2	3	18	3	5	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0004	25	24	1	0	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0005	3	0	0	3	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0006	1	0	1	0	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0007	1	1	0	0	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0008	1	1	0	0	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0009	1	0	0	1	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0010	1	1	0	0	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0011	1	0	0	1	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0012	1	0	0	1	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0013	1	0	0	1	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0014	1	1	0	0	0	0	C10orf95	chr10	102444837	102456543
C10orf95_chr10_102444837_102456543	0/0	g0015	1	0	1	0	0	0	C10orf95	chr10	102444837	102456543
C11orf16_chr11_8915076_8937947	0/0	g0001	67	6	5	49	0	7	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/1	g0002	65	5	18	36	2	3	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0003	21	2	7	0	4	8	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0004	19	2	1	13	0	3	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0005	15	6	0	8	0	1	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0006	13	5	2	5	0	1	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	1/0	g0007	11	8	2	0	0	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0008	11	0	0	7	1	3	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0009	10	1	2	6	0	1	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0010	7	6	1	0	0	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0011	6	6	0	0	0	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0012	6	6	0	0	0	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0013	4	0	1	0	3	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0014	4	0	1	2	0	1	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0015	4	1	3	0	0	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0016	4	0	0	4	0	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0017	4	0	0	0	2	2	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0018	3	0	2	0	1	0	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0019	3	2	0	0	0	1	C11orf16	chr11	8915076	8937947
C11orf16_chr11_8915076_8937947	0/0	g0020	3	0	0	3	0	0	C11orf16	chr11	8915076	8937947