JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C11orf24_chr11_68256338_68276973	0/0	g0113	1	0	0	1	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0114	1	1	0	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0115	1	0	0	0	0	1	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0116	1	0	1	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0117	1	1	0	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0118	1	1	0	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0119	1	1	0	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0120	1	1	0	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0121	1	1	0	0	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0122	1	0	0	1	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0123	1	0	0	1	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0124	1	0	0	0	0	1	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0125	1	0	0	1	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0126	1	0	0	1	0	0	C11orf24	chr11	68256338	68276973
C11orf24_chr11_68256338_68276973	0/0	g0127	1	0	0	1	0	0	C11orf24	chr11	68256338	68276973
C11orf42_chr11_6200557_6216135	0/1	g0001	162	14	32	102	3	10	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	1/0	g0002	59	40	7	3	2	6	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0003	48	0	1	38	1	8	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0004	34	1	10	15	5	3	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0005	11	3	4	0	2	2	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0006	11	3	1	7	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0007	11	1	8	2	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0008	9	0	0	9	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0009	8	2	3	3	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0010	8	0	0	8	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0011	7	0	0	3	0	4	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0012	7	0	5	2	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0013	6	5	1	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0014	4	4	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0015	4	0	0	0	0	4	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0016	3	3	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0017	3	0	0	0	1	2	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0018	2	0	1	1	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0019	2	1	0	1	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0020	2	0	1	0	0	1	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0021	2	0	0	0	0	2	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0022	2	2	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0023	2	0	1	0	1	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0024	2	2	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0025	1	1	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0026	1	0	0	1	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0027	1	1	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0028	1	1	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0029	1	1	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0030	1	0	0	1	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0031	1	0	0	1	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0032	1	0	0	0	0	1	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0033	1	1	0	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0034	1	0	1	0	0	0	C11orf42	chr11	6200557	6216135
C11orf42_chr11_6200557_6216135	0/0	g0035	1	0	1	0	0	0	C11orf42	chr11	6200557	6216135