JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C11orf52_chr11_111913913_111931871	0/0	g0031	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0032	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0033	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0034	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0035	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0036	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0037	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0038	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0039	1	0	1	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0040	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0041	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0042	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0043	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0044	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0045	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0046	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0047	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0048	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0049	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0050	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0051	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0052	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0053	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0054	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0055	1	0	0	0	0	1	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0056	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0057	1	0	1	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0058	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0059	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0060	1	1	0	0	0	0	C11orf52	chr11	111913913	111931871
C11orf52_chr11_111913913_111931871	0/0	g0061	1	0	0	1	0	0	C11orf52	chr11	111913913	111931871
C11orf54_chr11_93736672_93769749	0/1	g0001	25	7	4	9	0	4	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0002	22	3	5	12	1	1	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0003	8	2	0	6	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0004	8	1	3	1	0	3	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0005	5	0	0	5	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0006	5	1	3	0	0	1	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0007	4	0	1	3	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0008	4	0	2	2	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0009	4	0	2	0	1	1	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0010	3	1	1	1	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0011	3	0	0	3	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0012	3	3	0	0	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0013	3	0	0	3	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0014	3	2	1	0	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0015	2	0	0	2	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0016	2	0	0	1	0	1	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0017	2	0	0	2	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0018	2	0	0	2	0	0	C11orf54	chr11	93736672	93769749
C11orf54_chr11_93736672_93769749	0/0	g0019	2	0	1	1	0	0	C11orf54	chr11	93736672	93769749