Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZW10_chr11_113728187_113778692	0/0	g0250	1	0	0	1	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0251	1	0	1	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0252	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0253	1	0	0	1	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0254	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0255	1	0	0	1	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0256	1	0	1	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0257	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0258	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0259	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0260	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0261	1	0	1	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0262	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0263	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0264	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0265	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0266	1	0	0	0	1	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0267	1	0	1	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0268	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0269	1	0	1	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0270	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0271	1	0	0	0	0	1	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/1	g0272	1	0	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0273	1	0	1	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0274	1	0	0	0	0	1	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0275	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZW10_chr11_113728187_113778692	0/0	g0276	1	1	0	0	0	0	ZW10	chr11	113728187	113778692
ZWILCH_chr15_66500326_66555130	0/0	g0001	8	0	0	8	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0002	4	0	2	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0003	3	0	0	2	0	1	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0004	3	0	3	0	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0005	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0006	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0007	2	0	0	0	2	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0008	2	2	0	0	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0009	2	0	0	0	1	1	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0010	2	0	2	0	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0011	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0012	2	0	0	0	2	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0013	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0014	2	0	2	0	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0015	2	0	1	0	0	1	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0016	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0017	2	0	2	0	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0018	2	0	0	0	0	2	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0019	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0020	2	2	0	0	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0021	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0022	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130
ZWILCH_chr15_66500326_66555130	0/0	g0023	2	0	0	2	0	0	ZWILCH	chr15	66500326	66555130