JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C11orf65_chr11_108377755_108472529	0/0	g0314	1	0	0	1	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0315	1	0	0	1	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0316	1	0	0	1	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0317	1	0	0	0	0	1	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0318	1	0	0	1	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0319	1	0	0	0	0	1	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0320	1	0	0	0	0	1	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0321	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0322	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0323	1	0	1	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0324	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0325	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0326	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0327	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf65_chr11_108377755_108472529	0/0	g0328	1	1	0	0	0	0	C11orf65	chr11	108377755	108472529
C11orf68_chr11_65911810_65924062	0/1	g0001	273	24	67	132	13	36	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0002	28	27	1	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0003	23	5	0	18	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0004	20	5	0	15	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0005	11	9	2	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0006	7	0	0	7	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	1/0	g0007	7	6	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0008	7	6	1	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0009	3	3	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0010	3	3	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0011	3	0	0	3	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0012	3	3	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0013	2	2	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0014	2	2	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0015	2	1	1	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0016	2	0	0	0	1	1	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0017	1	1	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0018	1	1	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0019	1	1	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0020	1	0	1	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0021	1	0	1	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0022	1	0	0	0	0	1	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0023	1	0	0	1	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0024	1	1	0	0	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0025	1	0	0	1	0	0	C11orf68	chr11	65911810	65924062
C11orf68_chr11_65911810_65924062	0/0	g0026	1	0	0	1	0	0	C11orf68	chr11	65911810	65924062
C11orf71_chr11_114393532_114405511	1/1	g0000	422	94	82	184	12	48	C11orf71	chr11	114393532	114405511
C11orf80_chr11_66739769_66848516	0/0	g0001	1	0	0	0	1	0	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0002	1	0	0	0	0	1	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0003	1	0	1	0	0	0	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0004	1	1	0	0	0	0	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0005	1	0	0	1	0	0	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0006	1	0	0	1	0	0	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0007	1	0	0	1	0	0	C11orf80	chr11	66739769	66848516
C11orf80_chr11_66739769_66848516	0/0	g0008	1	0	0	1	0	0	C11orf80	chr11	66739769	66848516