JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C11orf87_chr11_109417190_109434167	0/0	g0005	13	2	2	6	0	3	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0006	10	0	0	10	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0007	2	0	0	2	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0008	2	1	1	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0009	2	0	0	2	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0010	2	2	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0011	2	0	0	2	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0012	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0013	1	0	0	0	0	1	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0014	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0015	1	0	0	1	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0016	1	0	0	1	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0017	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0018	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0019	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0020	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0021	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf87_chr11_109417190_109434167	0/0	g0022	1	1	0	0	0	0	C11orf87	chr11	109417190	109434167
C11orf91_chr11_33693261_33705826	0/0	g0001	118	2	18	87	2	9	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0002	80	7	17	41	3	12	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0003	41	1	1	34	0	5	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0004	34	3	9	11	2	9	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0005	24	8	3	13	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0006	18	0	7	10	1	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0007	12	9	3	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/1	g0008	12	0	4	5	0	2	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0009	10	9	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0010	10	10	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0011	9	6	0	3	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0012	8	5	2	0	0	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0013	6	2	2	2	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0014	5	4	0	0	0	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0015	5	1	2	2	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0016	5	0	2	0	2	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0017	5	1	0	2	1	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0018	4	2	1	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0019	4	0	2	0	0	2	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0020	3	0	1	0	0	2	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0021	3	0	0	2	0	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0022	3	2	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0023	3	3	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0024	3	2	0	0	1	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0025	2	2	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0026	2	0	0	0	2	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0027	2	0	2	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0028	2	2	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0029	2	0	0	2	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0030	2	2	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0031	2	0	1	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0032	2	0	1	0	1	0	C11orf91	chr11	33693261	33705826