JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C11orf91_chr11_33693261_33705826	0/0	g0033	2	1	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0034	2	2	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0035	1	0	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0036	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0037	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0038	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0039	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0040	1	0	0	0	0	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0041	1	0	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0042	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0043	1	0	0	0	1	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0044	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0045	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0046	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0047	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0048	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0049	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0050	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0051	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0052	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0053	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0054	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0055	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0056	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0057	1	0	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0058	1	0	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0059	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0060	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0061	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0062	1	0	1	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0063	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0064	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0065	1	0	0	0	0	1	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0066	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0067	1	0	0	1	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	1/0	g0068	1	0	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf91_chr11_33693261_33705826	0/0	g0069	1	1	0	0	0	0	C11orf91	chr11	33693261	33705826
C11orf96_chr11_43937637_43948878	1/1	g0000	438	98	74	204	16	44	C11orf96	chr11	43937637	43948878
C11orf97_chr11_94507461_94537123	0/0	g0001	56	3	8	37	1	7	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0002	29	2	6	18	1	2	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0003	27	2	3	19	0	3	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/1	g0004	20	0	0	13	0	6	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0005	9	0	0	8	0	1	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0006	9	9	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0007	8	0	1	5	0	2	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0008	7	0	3	0	0	4	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0009	6	1	2	3	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0010	6	0	1	2	2	1	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0011	6	6	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0012	5	4	1	0	0	0	C11orf97	chr11	94507461	94537123