JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C11orf97_chr11_94507461_94537123	0/0	g0163	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0164	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0165	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0166	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0167	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0168	1	0	1	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0169	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0170	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0171	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0172	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0173	1	0	1	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0174	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0175	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0176	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0177	1	0	0	0	0	1	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0178	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0179	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0180	1	0	0	0	0	1	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0181	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0182	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0183	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0184	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0185	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0186	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0187	1	0	1	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0188	1	0	0	0	0	1	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0189	1	0	1	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0190	1	1	0	0	0	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0191	1	0	0	0	1	0	C11orf97	chr11	94507461	94537123
C11orf97_chr11_94507461_94537123	0/0	g0192	1	0	0	1	0	0	C11orf97	chr11	94507461	94537123
C11orf98_chr11_62657817_62670210	0/0	g0001	96	7	13	68	2	6	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0002	78	5	27	21	10	15	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0003	33	4	13	8	1	7	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/1	g0004	20	6	4	8	0	1	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0005	18	16	1	0	1	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0006	12	11	1	0	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0007	12	0	3	4	0	5	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	1/0	g0008	11	7	1	0	1	1	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0009	8	1	1	5	0	1	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0010	6	0	1	3	0	2	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0011	5	3	1	1	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0012	5	0	3	2	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0013	5	5	0	0	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0014	4	3	1	0	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0015	4	3	0	1	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0016	3	2	1	0	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0017	3	2	1	0	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0018	3	3	0	0	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0019	3	0	1	2	0	0	C11orf98	chr11	62657817	62670210
C11orf98_chr11_62657817_62670210	0/0	g0020	3	2	1	0	0	0	C11orf98	chr11	62657817	62670210