JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACOT12_chr5_81324996_81399134	0/0	g0236	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0237	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0238	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0239	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0240	1	0	0	0	0	1	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0241	1	0	0	0	0	1	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0242	1	0	1	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0243	1	0	1	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0244	1	0	1	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0245	1	0	1	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0246	1	0	0	0	0	1	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0247	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0248	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0249	1	0	0	0	0	1	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0250	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0251	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0252	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0253	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0254	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0255	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0256	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0257	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0258	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0259	1	1	0	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0260	1	0	0	0	1	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0261	1	0	1	0	0	0	ACOT12	chr5	81324996	81399134
ACOT12_chr5_81324996_81399134	0/0	g0262	1	0	0	0	1	0	ACOT12	chr5	81324996	81399134
ACOT13_chr6_24662077_24710046	0/0	g0001	22	0	12	9	0	1	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0002	13	1	3	6	0	3	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	1/0	g0003	12	0	2	8	1	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0004	10	0	2	3	2	3	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0005	6	0	2	4	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0006	6	6	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0007	4	0	0	4	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0008	4	0	0	4	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0009	4	0	2	2	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0010	4	2	2	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0011	4	0	0	3	0	1	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0012	4	0	1	0	2	1	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0013	3	0	0	3	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0014	3	0	0	0	0	3	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0015	3	3	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0016	3	0	0	3	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0017	3	0	0	3	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0018	2	0	0	0	1	1	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0019	2	0	0	2	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0020	2	0	1	1	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0021	2	2	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0022	2	0	0	2	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0023	2	0	0	0	0	2	ACOT13	chr6	24662077	24710046