JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C12orf4_chr12_4482735_4543469	0/0	g0152	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0153	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0154	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0155	1	0	1	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0156	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0157	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0158	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0159	1	0	1	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0160	1	0	0	0	1	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0161	1	0	1	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0162	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0163	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0164	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0165	1	0	0	1	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0166	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0167	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0168	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0169	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0170	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0171	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0172	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0173	1	0	1	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0174	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0175	1	0	1	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0176	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0177	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0178	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0179	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0180	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0181	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0182	1	0	0	0	0	1	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0183	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf4_chr12_4482735_4543469	0/0	g0184	1	1	0	0	0	0	C12orf4	chr12	4482735	4543469
C12orf50_chr12_87975035_88034401	0/0	g0001	10	3	6	0	1	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0002	6	0	5	1	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0003	5	3	2	0	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/1	g0004	5	0	3	0	0	1	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0005	5	0	2	0	1	2	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0006	5	0	0	5	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0007	5	5	0	0	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0008	4	4	0	0	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0009	3	0	0	3	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0010	3	0	0	3	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0011	3	3	0	0	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0012	2	2	0	0	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0013	2	1	1	0	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0014	2	0	0	0	0	2	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0015	2	0	0	0	2	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0016	2	0	0	2	0	0	C12orf50	chr12	87975035	88034401
C12orf50_chr12_87975035_88034401	0/0	g0017	2	0	0	2	0	0	C12orf50	chr12	87975035	88034401