JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C12orf56_chr12_64259762_64395758	0/0	g0299	1	0	0	0	0	1	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0300	1	0	0	1	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0301	1	0	0	1	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0302	1	0	0	1	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0303	1	0	0	1	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0304	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0305	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0306	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0307	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0308	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0309	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0310	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf56_chr12_64259762_64395758	0/0	g0311	1	1	0	0	0	0	C12orf56	chr12	64259762	64395758
C12orf57_chr12_6939022_6951002	0/0	g0001	254	62	40	115	8	29	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0002	63	2	15	36	2	8	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0003	38	0	4	21	3	10	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0004	26	16	5	5	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0005	17	3	2	12	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0006	5	0	3	0	2	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0007	5	5	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0008	3	0	2	0	1	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0009	3	0	0	3	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0010	2	2	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0011	1	0	0	1	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	1/0	g0012	1	0	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0013	1	1	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0014	1	1	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0015	1	0	1	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0016	1	1	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0017	1	1	0	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0018	1	0	0	1	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0019	1	0	1	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0020	1	0	1	0	0	0	C12orf57	chr12	6939022	6951002
C12orf57_chr12_6939022_6951002	0/0	g0021	1	0	0	0	0	1	C12orf57	chr12	6939022	6951002
C12orf60_chr12_14798670_14829415	1/0	g0001	67	9	10	27	7	13	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0002	45	6	17	16	1	5	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0003	37	11	6	12	2	6	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0004	25	1	7	17	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0005	15	0	1	12	0	2	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0006	14	0	12	1	1	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/1	g0007	13	0	4	5	1	2	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0008	11	9	0	2	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0009	10	0	0	10	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0010	9	9	0	0	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0011	6	1	0	1	2	2	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0012	6	0	0	6	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0013	6	0	0	6	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0014	5	0	0	5	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0015	5	4	1	0	0	0	C12orf60	chr12	14798670	14829415
C12orf60_chr12_14798670_14829415	0/0	g0016	4	0	4	0	0	0	C12orf60	chr12	14798670	14829415