JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C12orf75_chr12_105325691_105376518	0/0	g0345	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0346	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0347	1	0	0	0	0	1	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0348	1	0	0	1	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0349	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0350	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0351	1	0	1	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0352	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0353	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0354	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0355	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf75_chr12_105325691_105376518	0/0	g0356	1	1	0	0	0	0	C12orf75	chr12	105325691	105376518
C12orf76_chr12_110036177_110053522	0/1	g0001	115	17	37	43	4	13	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	1/0	g0002	38	3	4	21	2	7	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0003	24	0	0	24	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0004	23	4	0	18	0	1	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0005	13	5	7	0	1	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0006	11	0	10	0	1	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0007	9	8	1	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0008	7	5	2	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0009	7	7	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0010	6	1	0	4	0	1	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0011	5	1	2	0	1	1	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0012	5	2	1	0	0	2	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0013	5	0	0	5	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0014	3	0	0	3	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0015	3	0	1	0	2	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0016	3	3	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0017	3	0	0	3	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0018	3	2	1	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0019	3	3	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0020	3	3	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0021	3	3	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0022	2	0	0	2	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0023	2	0	0	2	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0024	2	0	0	1	0	1	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0025	2	0	0	2	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0026	2	0	1	0	0	1	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0027	2	2	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0028	2	0	0	0	0	2	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0029	2	2	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0030	2	2	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0031	2	0	0	2	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0032	2	2	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0033	2	2	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0034	2	2	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0035	2	0	2	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0036	1	1	0	0	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0037	1	0	0	1	0	0	C12orf76	chr12	110036177	110053522
C12orf76_chr12_110036177_110053522	0/0	g0038	1	0	0	1	0	0	C12orf76	chr12	110036177	110053522