JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACOT13_chr6_24662077_24710046	0/0	g0274	1	0	0	0	0	1	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0275	1	0	1	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0276	1	0	0	0	1	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0277	1	0	0	0	1	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0278	1	0	1	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0279	1	1	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0280	1	1	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0281	1	0	1	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0282	1	0	1	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0283	1	1	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0284	1	1	0	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0285	1	0	1	0	0	0	ACOT13	chr6	24662077	24710046
ACOT13_chr6_24662077_24710046	0/0	g0286	1	0	1	0	0	0	ACOT13	chr6	24662077	24710046
ACOT1_chr14_73532143_73548796	0/0	g0001	19	1	7	3	3	5	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0002	13	1	5	0	1	6	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0003	8	1	7	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0004	8	8	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0005	6	5	1	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0006	5	0	0	2	0	3	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0007	4	4	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0008	4	3	1	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0009	3	3	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0010	3	3	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0011	2	2	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0012	2	2	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0013	2	2	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0014	1	0	1	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0015	1	0	1	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0016	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0017	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0018	1	0	0	0	0	1	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0019	1	0	0	0	0	1	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0020	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0021	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0022	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0023	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0024	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0025	1	0	0	1	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0026	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0027	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0028	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0029	1	0	1	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0030	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0031	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0032	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0033	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0034	1	0	1	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0035	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0036	1	1	0	0	0	0	ACOT1	chr14	73532143	73548796
ACOT1_chr14_73532143_73548796	0/0	g0037	1	0	1	0	0	0	ACOT1	chr14	73532143	73548796