JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C14orf93_chr14_22980894_23015143	0/0	g0301	1	0	1	0	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0302	1	1	0	0	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0303	1	0	0	1	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0304	1	0	0	0	0	1	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0305	1	0	0	0	0	1	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0306	1	1	0	0	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0307	1	1	0	0	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0308	1	0	0	1	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0309	1	0	0	1	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0310	1	0	0	1	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0311	1	0	0	1	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0312	1	0	1	0	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0313	1	0	1	0	0	0	C14orf93	chr14	22980894	23015143
C14orf93_chr14_22980894_23015143	0/0	g0314	1	0	0	1	0	0	C14orf93	chr14	22980894	23015143
C15orf39_chr15_75196882_75217169	0/1	g0001	205	35	47	89	7	26	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	1/0	g0002	37	1	0	32	0	3	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0003	13	5	3	0	0	5	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0004	9	8	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0005	8	0	0	8	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0006	5	4	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0007	5	5	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0008	4	4	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0009	4	4	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0010	4	4	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0011	4	4	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0012	3	0	0	2	0	1	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0013	2	0	0	2	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0014	2	1	0	1	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0015	2	2	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0016	2	2	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0017	2	2	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0018	2	0	2	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0019	2	1	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0020	2	0	0	2	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0021	1	0	0	1	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0022	1	0	0	1	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0023	1	0	0	0	0	1	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0024	1	0	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0025	1	0	0	1	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0026	1	1	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0027	1	0	0	0	1	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0028	1	0	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0029	1	0	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0030	1	0	1	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0031	1	0	0	0	0	1	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0032	1	0	0	0	0	1	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0033	1	1	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0034	1	0	0	1	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0035	1	1	0	0	0	0	C15orf39	chr15	75196882	75217169
C15orf39_chr15_75196882_75217169	0/0	g0036	1	0	0	1	0	0	C15orf39	chr15	75196882	75217169