JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C15orf40_chr15_82989817_83016639	0/0	g0188	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0189	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0190	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0191	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0192	1	0	1	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0193	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0194	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0195	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0196	1	0	1	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0197	1	0	1	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0198	1	0	1	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0199	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/1	g0200	1	0	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0201	1	0	0	0	0	1	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0202	1	0	0	0	0	1	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0203	1	0	1	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0204	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf40_chr15_82989817_83016639	0/0	g0205	1	1	0	0	0	0	C15orf40	chr15	82989817	83016639
C15orf48_chr15_45425610_45438340	0/0	g0001	111	24	26	46	2	13	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0002	95	0	15	76	1	3	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	1/1	g0003	82	7	20	31	4	18	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0004	40	3	8	18	1	10	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0005	29	18	1	10	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0006	18	17	1	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0007	10	8	2	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0008	7	7	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0009	3	3	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0010	3	0	0	3	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0011	3	3	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0012	2	0	1	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0013	2	1	1	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0014	2	0	0	2	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0015	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0016	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0017	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0018	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0019	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0020	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0021	1	1	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0022	1	0	0	1	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0023	1	1	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0024	1	1	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0025	1	1	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0026	1	1	0	0	0	0	C15orf48	chr15	45425610	45438340
C15orf48_chr15_45425610_45438340	0/0	g0027	1	0	1	0	0	0	C15orf48	chr15	45425610	45438340
C15orf61_chr15_67516131_67535146	0/0	g0001	118	13	23	63	4	15	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0002	90	27	11	49	1	2	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0003	60	2	8	41	3	6	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/1	g0004	36	10	12	1	4	8	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0005	21	5	1	10	0	5	C15orf61	chr15	67516131	67535146