JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C15orf61_chr15_67516131_67535146	0/0	g0006	14	0	0	14	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0007	6	2	0	4	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0008	6	6	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0009	5	5	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0010	5	5	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0011	5	0	1	4	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0012	5	0	0	4	0	1	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0013	5	3	0	0	1	1	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0014	4	4	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0015	3	0	0	2	1	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0016	3	3	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0017	2	1	1	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0018	2	0	0	2	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0019	2	2	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0020	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0021	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0022	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0023	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0024	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0025	1	0	0	0	0	1	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0026	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0027	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0028	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0029	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0030	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0031	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	1/0	g0032	1	0	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0033	1	0	1	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0034	1	0	0	0	0	1	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0035	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0036	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0037	1	0	0	0	0	1	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0038	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0039	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0040	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0041	1	1	0	0	0	0	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0042	1	0	0	0	0	1	C15orf61	chr15	67516131	67535146
C15orf61_chr15_67516131_67535146	0/0	g0043	1	0	0	1	0	0	C15orf61	chr15	67516131	67535146
C15orf62_chr15_40764980_40777449	1/1	g0000	400	92	74	170	16	46	C15orf62	chr15	40764980	40777449
C16orf46_chr16_81055980_81082238	0/0	g0001	45	8	10	18	2	7	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0002	22	4	4	12	1	1	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0003	17	0	1	13	0	3	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0004	9	0	0	9	0	0	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0005	9	4	1	4	0	0	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0006	8	1	0	3	1	3	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0007	7	0	0	7	0	0	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0008	6	2	4	0	0	0	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0009	6	0	2	0	0	4	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	1/0	g0010	6	4	1	0	0	0	C16orf46	chr16	81055980	81082238
C16orf46_chr16_81055980_81082238	0/0	g0011	5	0	0	5	0	0	C16orf46	chr16	81055980	81082238