JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C16orf78_chr16_49368804_49404431	0/0	g0148	1	0	0	1	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0149	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0150	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0151	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0152	1	0	0	0	0	1	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0153	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0154	1	0	1	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0155	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0156	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0157	1	0	0	1	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0158	1	0	0	1	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0159	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0160	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0161	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0162	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf78_chr16_49368804_49404431	0/0	g0163	1	1	0	0	0	0	C16orf78	chr16	49368804	49404431
C16orf82_chr16_27061927_27074166	1/1	g0000	442	96	70	214	16	44	C16orf82	chr16	27061927	27074166
C16orf86_chr16_67661814_67673755	1/1	g0001	268	83	60	76	11	36	C16orf86	chr16	67661814	67673755
C16orf86_chr16_67661814_67673755	0/0	g0002	5	0	4	0	1	0	C16orf86	chr16	67661814	67673755
C16orf86_chr16_67661814_67673755	0/0	g0003	2	2	0	0	0	0	C16orf86	chr16	67661814	67673755
C16orf86_chr16_67661814_67673755	0/0	g0004	1	1	0	0	0	0	C16orf86	chr16	67661814	67673755
C16orf87_chr16_46791603_46836180	0/0	g0001	6	0	4	0	2	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0002	5	1	1	1	2	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0003	4	0	4	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0004	3	1	0	0	0	2	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0005	3	1	1	1	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0006	3	3	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	1/0	g0007	3	1	1	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0008	2	1	1	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0009	2	0	2	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0010	2	0	1	1	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0011	2	2	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0012	2	0	2	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0013	2	0	0	2	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0014	2	0	0	2	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0015	2	0	0	1	0	1	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0016	2	2	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0017	2	0	2	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0018	2	0	0	0	0	2	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0019	2	2	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0020	2	2	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0021	2	0	0	2	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0022	2	0	0	2	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0023	2	2	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0024	2	2	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0025	1	0	1	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0026	1	1	0	0	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0027	1	0	0	1	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0028	1	0	0	1	0	0	C16orf87	chr16	46791603	46836180
C16orf87_chr16_46791603_46836180	0/0	g0029	1	1	0	0	0	0	C16orf87	chr16	46791603	46836180