JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C17orf113_chr17_42033232_42055601	0/0	g0100	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0101	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0102	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	1/0	g0103	1	0	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0104	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0105	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0106	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0107	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0108	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0109	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0110	1	0	0	0	0	1	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0111	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0112	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0113	1	0	0	1	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0114	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0115	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0116	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0117	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0118	1	0	1	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0119	1	1	0	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0120	1	0	1	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0121	1	0	1	0	0	0	C17orf113	chr17	42033232	42055601
C17orf113_chr17_42033232_42055601	0/0	g0122	1	0	1	0	0	0	C17orf113	chr17	42033232	42055601
C17orf114_chr17_4796159_4807328	1/0	g0001	186	24	28	104	5	24	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/1	g0002	138	38	28	52	4	15	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0003	58	3	8	39	5	3	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0004	16	15	1	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0005	6	4	2	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0006	5	4	1	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0007	4	0	2	0	0	2	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0008	2	2	0	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0009	1	0	0	1	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0010	1	0	0	1	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0011	1	0	1	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0012	1	0	0	0	0	1	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0013	1	0	0	0	0	1	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0014	1	0	1	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0015	1	0	1	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0016	1	0	0	1	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0017	1	1	0	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0018	1	1	0	0	0	0	C17orf114	chr17	4796159	4807328
C17orf114_chr17_4796159_4807328	0/0	g0019	1	0	1	0	0	0	C17orf114	chr17	4796159	4807328
C17orf49_chr17_7009782_7022520	1/0	g0001	267	66	41	117	13	29	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/1	g0002	49	1	24	19	1	3	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0003	20	13	2	0	1	4	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0004	14	0	0	14	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0005	4	4	0	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0006	4	0	0	4	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0007	3	0	0	3	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0008	2	0	0	2	0	0	C17orf49	chr17	7009782	7022520