JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C17orf49_chr17_7009782_7022520	0/0	g0009	2	1	0	0	1	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0010	2	0	2	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0011	1	1	0	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0012	1	1	0	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0013	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0014	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0015	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0016	1	0	0	0	0	1	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0017	1	1	0	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0018	1	1	0	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0019	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0020	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0021	1	0	0	0	0	1	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0022	1	0	1	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0023	1	1	0	0	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0024	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf49_chr17_7009782_7022520	0/0	g0025	1	0	0	1	0	0	C17orf49	chr17	7009782	7022520
C17orf50_chr17_35755887_35770079	1/0	g0001	104	9	28	53	3	10	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0002	32	2	7	15	6	2	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0003	21	2	4	10	0	5	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0004	13	1	7	4	1	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0005	11	4	0	5	0	2	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/1	g0006	10	1	1	5	0	2	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0007	9	8	1	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0008	7	3	0	4	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0009	7	3	1	0	0	3	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0010	7	7	0	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0011	6	0	3	2	0	1	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0012	5	0	0	5	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0013	5	1	4	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0014	5	0	0	1	0	4	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0015	5	0	0	5	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0016	5	0	0	5	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0017	4	0	2	2	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0018	4	3	0	1	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0019	4	0	0	3	0	1	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0020	4	3	1	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0021	4	0	0	1	0	3	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0022	3	3	0	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0023	3	0	1	2	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0024	3	0	0	3	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0025	3	1	0	1	0	1	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0026	3	3	0	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0027	3	0	1	0	0	2	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0028	3	0	0	3	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0029	3	3	0	0	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0030	3	0	0	2	0	1	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0031	3	1	0	2	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0032	2	0	0	2	0	0	C17orf50	chr17	35755887	35770079
C17orf50_chr17_35755887_35770079	0/0	g0033	2	0	0	2	0	0	C17orf50	chr17	35755887	35770079