JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C17orf78_chr17_37370985_37397708	0/0	g0372	1	0	0	0	0	1	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0373	1	0	0	0	0	1	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0374	1	0	1	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0375	1	0	0	0	0	1	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0376	1	0	0	0	0	1	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0377	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0378	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0379	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0380	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0381	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0382	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0383	1	0	1	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0384	1	0	1	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0385	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0386	1	0	1	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0387	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0388	1	0	0	0	0	1	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0389	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0390	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0391	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0392	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0393	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0394	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0395	1	0	0	0	0	1	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0396	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0397	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0398	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0399	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0400	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0401	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0402	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0403	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0404	1	1	0	0	0	0	C17orf78	chr17	37370985	37397708
C17orf78_chr17_37370985_37397708	0/0	g0405	1	0	0	1	0	0	C17orf78	chr17	37370985	37397708
C17orf80_chr17_73227433_73253959	0/0	g0001	33	0	17	12	0	4	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0002	28	2	7	19	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0003	24	2	6	12	1	3	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0004	14	5	2	3	1	3	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0005	13	2	1	5	1	4	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0006	10	2	0	7	0	1	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0007	9	4	2	3	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0008	8	2	0	5	0	1	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0009	7	2	2	1	0	2	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0010	6	0	0	3	1	2	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0011	6	0	0	6	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0012	5	5	0	0	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0013	5	5	0	0	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0014	5	0	0	5	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0015	4	0	0	4	0	0	C17orf80	chr17	73227433	73253959
C17orf80_chr17_73227433_73253959	0/0	g0016	4	0	0	4	0	0	C17orf80	chr17	73227433	73253959