JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C17orf98_chr17_38830086_38846438	0/0	g0151	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0152	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0153	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0154	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0155	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0156	1	0	1	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0157	1	0	1	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0158	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0159	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0160	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0161	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0162	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0163	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0164	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0165	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0166	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0167	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0168	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0169	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0170	1	1	0	0	0	0	C17orf98	chr17	38830086	38846438
C17orf98_chr17_38830086_38846438	0/0	g0171	1	0	0	1	0	0	C17orf98	chr17	38830086	38846438
C17orf99_chr17_78141385_78171297	0/0	g0001	5	0	1	3	1	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0002	3	0	0	3	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0003	3	0	2	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0004	3	0	0	3	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0005	3	1	2	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0006	2	0	2	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0007	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0008	2	0	1	0	1	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0009	2	1	0	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0010	2	0	1	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0011	2	0	1	0	1	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0012	2	2	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0013	2	2	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0014	2	2	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0015	2	2	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0016	2	0	0	1	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0017	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0018	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0019	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0020	2	0	2	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0021	2	0	2	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0022	2	0	0	1	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0023	2	0	2	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0024	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0025	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0026	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0027	2	0	2	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0028	2	0	1	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0029	2	0	0	2	0	0	C17orf99	chr17	78141385	78171297