JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C17orf99_chr17_78141385_78171297	0/0	g0380	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0381	1	0	1	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0382	1	0	1	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0383	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0384	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0385	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0386	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0387	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0388	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0389	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0390	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0391	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0392	1	0	0	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0393	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0394	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0395	1	0	0	1	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0396	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0397	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0398	1	0	0	0	1	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0399	1	0	0	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0400	1	0	1	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0401	1	0	0	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0402	1	0	0	0	0	1	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0403	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0404	1	0	1	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0405	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0406	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0407	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0408	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C17orf99_chr17_78141385_78171297	0/0	g0409	1	1	0	0	0	0	C17orf99	chr17	78141385	78171297
C18orf21_chr18_35967679_35984278	1/0	g0001	68	15	24	19	3	6	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0002	54	11	7	27	1	8	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0003	51	1	5	34	2	9	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0004	42	14	9	16	1	2	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0005	22	5	4	10	0	3	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0006	15	0	0	12	0	3	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0007	14	1	6	7	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0008	12	12	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/1	g0009	12	2	5	2	1	1	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0010	10	0	1	9	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0011	10	0	0	10	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0012	7	1	2	0	1	3	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0013	5	5	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0014	5	5	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0015	5	0	0	5	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0016	4	0	0	4	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0017	4	0	0	4	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0018	3	0	0	3	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0019	3	3	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0020	3	3	0	0	0	0	C18orf21	chr18	35967679	35984278