JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C18orf21_chr18_35967679_35984278	0/0	g0021	3	3	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0022	3	0	0	2	0	1	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0023	2	2	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0024	2	2	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0025	2	1	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0026	2	0	0	2	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0027	2	0	0	2	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0028	2	0	1	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0029	2	2	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0030	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0031	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0032	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0033	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0034	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0035	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0036	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0037	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0038	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0039	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0040	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0041	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0042	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0043	1	0	0	0	1	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0044	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0045	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0046	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0047	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0048	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0049	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0050	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0051	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0052	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0053	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0054	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0055	1	0	0	1	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0056	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0057	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0058	1	1	0	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0059	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf21_chr18_35967679_35984278	0/0	g0060	1	0	1	0	0	0	C18orf21	chr18	35967679	35984278
C18orf32_chr18_49472243_49492234	0/0	g0001	45	0	5	35	2	3	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0002	44	13	4	26	0	1	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0003	41	1	10	25	3	2	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0004	14	0	2	11	0	1	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0005	10	9	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0006	7	0	4	3	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0007	7	5	1	0	0	1	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0008	7	0	0	6	1	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0009	6	0	0	6	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0010	6	0	6	0	0	0	C18orf32	chr18	49472243	49492234