JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C18orf32_chr18_49472243_49492234	0/0	g0161	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0162	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0163	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0164	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0165	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0166	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0167	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0168	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0169	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0170	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0171	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0172	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0173	1	0	0	0	0	1	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0174	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0175	1	0	0	0	0	1	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0176	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0177	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0178	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0179	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0180	1	0	0	1	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0181	1	0	0	0	0	1	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0182	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0183	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0184	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0185	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0186	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0187	1	1	0	0	0	0	C18orf32	chr18	49472243	49492234
C18orf32_chr18_49472243_49492234	0/0	g0188	1	0	1	0	0	0	C18orf32	chr18	49472243	49492234
C18orf54_chr18_54352906_54387034	0/0	g0001	62	8	12	33	1	8	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0002	28	1	2	19	3	3	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0003	18	10	2	1	1	4	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0004	13	1	6	5	1	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/1	g0005	13	0	9	0	0	3	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0006	11	0	0	11	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0007	10	10	0	0	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0008	9	6	0	0	2	1	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0009	7	0	0	7	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0010	7	0	6	0	0	1	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0011	5	5	0	0	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0012	5	5	0	0	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0013	5	1	2	0	0	2	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0014	5	0	1	4	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0015	4	0	0	4	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0016	3	0	0	3	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0017	3	0	1	2	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0018	3	0	0	3	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0019	2	0	0	2	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0020	2	1	1	0	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0021	2	0	2	0	0	0	C18orf54	chr18	54352906	54387034
C18orf54_chr18_54352906_54387034	0/0	g0022	2	0	0	0	1	1	C18orf54	chr18	54352906	54387034