JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C19orf25_chr19_1468201_1484215	0/0	g0092	1	0	1	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0093	1	0	0	1	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0094	1	0	0	1	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0095	1	0	0	1	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0096	1	0	1	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0097	1	0	1	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0098	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0099	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0100	1	0	0	0	1	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0101	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0102	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0103	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0104	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0105	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0106	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0107	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0108	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0109	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0110	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0111	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0112	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0113	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0114	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf25_chr19_1468201_1484215	0/0	g0115	1	1	0	0	0	0	C19orf25	chr19	1468201	1484215
C19orf33_chr19_38299251_38310006	1/1	g0001	323	77	51	157	15	21	C19orf33	chr19	38299251	38310006
C19orf33_chr19_38299251_38310006	0/0	g0002	73	4	22	31	1	15	C19orf33	chr19	38299251	38310006
C19orf33_chr19_38299251_38310006	0/0	g0003	8	4	3	0	0	1	C19orf33	chr19	38299251	38310006
C19orf33_chr19_38299251_38310006	0/0	g0004	1	1	0	0	0	0	C19orf33	chr19	38299251	38310006
C19orf33_chr19_38299251_38310006	0/0	g0005	1	0	0	0	0	1	C19orf33	chr19	38299251	38310006
C19orf38_chr19_10843415_10874790	0/0	g0001	4	0	2	2	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0002	3	0	0	3	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0003	2	0	2	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0004	2	0	0	2	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0005	2	0	2	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0006	2	0	0	2	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0007	2	0	0	2	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0008	2	2	0	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0009	2	0	1	0	1	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0010	2	0	0	0	0	2	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0011	2	0	2	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0012	2	2	0	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0013	1	0	0	1	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0014	1	1	0	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0015	1	0	1	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0016	1	0	1	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0017	1	0	1	0	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0018	1	0	0	1	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0019	1	0	0	1	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0020	1	0	0	1	0	0	C19orf38	chr19	10843415	10874790
C19orf38_chr19_10843415_10874790	0/0	g0021	1	0	0	1	0	0	C19orf38	chr19	10843415	10874790