JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C19orf53_chr19_13769456_13783773	0/0	g0064	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0065	1	0	0	0	0	1	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0066	1	0	0	1	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0067	1	0	0	1	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/1	g0068	1	0	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0069	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0070	1	0	1	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0071	1	0	1	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0072	1	0	0	0	1	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0073	1	0	0	1	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0074	1	0	0	0	1	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0075	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0076	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0077	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0078	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf53_chr19_13769456_13783773	0/0	g0079	1	1	0	0	0	0	C19orf53	chr19	13769456	13783773
C19orf67_chr19_14076624_14090783	1/0	g0001	114	14	22	63	2	12	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0002	63	12	9	30	3	9	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0003	60	0	16	29	2	13	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0004	24	0	12	0	4	8	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/1	g0005	16	0	1	10	0	4	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0006	6	3	0	3	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0007	6	6	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0008	5	5	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0009	5	5	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0010	4	4	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0011	4	3	1	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0012	4	0	0	4	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0013	4	4	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0014	4	0	3	0	1	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0015	4	4	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0016	3	3	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0017	3	3	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0018	3	3	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0019	2	0	0	0	0	2	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0020	2	1	0	1	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0021	2	0	0	2	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0022	2	0	1	1	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0023	2	0	0	2	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0024	2	1	1	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0025	2	0	1	0	0	1	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0026	2	0	0	2	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0027	2	1	0	1	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0028	2	0	0	2	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0029	2	0	0	2	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0030	2	2	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0031	1	0	0	1	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0032	1	0	1	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0033	1	1	0	0	0	0	C19orf67	chr19	14076624	14090783
C19orf67_chr19_14076624_14090783	0/0	g0034	1	1	0	0	0	0	C19orf67	chr19	14076624	14090783