JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C19orf81_chr19_50644445_50664306	0/0	g0216	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0217	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0218	1	0	0	0	1	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0219	1	0	0	0	1	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0220	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0221	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0222	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0223	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0224	1	0	0	0	0	1	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0225	1	0	0	0	0	1	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0226	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0227	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0228	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0229	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0230	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0231	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0232	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0233	1	0	0	0	0	1	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0234	1	0	0	0	0	1	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0235	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0236	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0237	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0238	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0239	1	0	0	0	0	1	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0240	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0241	1	0	1	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0242	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0243	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0244	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0245	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0246	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0247	1	0	1	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0248	1	0	1	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0249	1	0	0	0	0	1	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0250	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0251	1	0	0	1	0	0	C19orf81	chr19	50644445	50664306
C19orf81_chr19_50644445_50664306	0/0	g0252	1	1	0	0	0	0	C19orf81	chr19	50644445	50664306
C19orf84_chr19_51383289_51395591	1/0	g0001	159	26	43	54	11	24	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/1	g0002	102	2	23	59	3	14	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0003	78	8	11	52	1	6	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0004	35	27	5	0	1	2	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0005	9	0	0	9	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0006	8	8	0	0	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0007	7	0	0	7	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0008	5	5	0	0	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0009	5	0	0	5	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0010	5	4	1	0	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0011	4	4	0	0	0	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0012	4	0	2	0	2	0	C19orf84	chr19	51383289	51395591
C19orf84_chr19_51383289_51395591	0/0	g0013	2	2	0	0	0	0	C19orf84	chr19	51383289	51395591