JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf109_chr1_37676570_37695529	0/0	g0169	1	0	1	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0170	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0171	1	0	1	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0172	1	0	0	0	0	1	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0173	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0174	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0175	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0176	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0177	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0178	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0179	1	0	1	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0180	1	0	1	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0181	1	0	0	0	0	1	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0182	1	0	0	0	0	1	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0183	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0184	1	0	0	0	0	1	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0185	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0186	1	0	0	1	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0187	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0188	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0189	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0190	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0191	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0192	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0193	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0194	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf109_chr1_37676570_37695529	0/0	g0195	1	1	0	0	0	0	C1orf109	chr1	37676570	37695529
C1orf115_chr1_220685363_220704153	0/0	g0001	119	16	33	45	8	17	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0002	60	0	9	44	3	4	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0003	40	7	2	29	0	2	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0004	16	0	3	10	1	2	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0005	13	0	3	9	0	1	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0006	11	10	0	1	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	1/0	g0007	11	2	3	3	0	2	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0008	8	0	2	6	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0009	7	2	1	3	0	1	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0010	6	6	0	0	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0011	6	4	2	0	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0012	6	6	0	0	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0013	5	1	0	4	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0014	5	5	0	0	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0015	5	0	4	0	1	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0016	4	0	2	0	0	2	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0017	4	0	0	3	0	1	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0018	4	4	0	0	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0019	3	0	0	2	0	1	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0020	3	3	0	0	0	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0021	3	0	1	1	0	1	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0022	3	0	0	2	1	0	C1orf115	chr1	220685363	220704153
C1orf115_chr1_220685363_220704153	0/0	g0023	3	0	1	0	2	0	C1orf115	chr1	220685363	220704153