JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf159_chr1_1076823_1121089	0/0	g0275	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0276	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0277	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0278	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0279	1	0	0	1	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0280	1	0	0	1	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0281	1	0	0	1	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0282	1	0	0	1	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0283	1	0	0	0	0	1	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0284	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0285	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0286	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0287	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0288	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0289	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0290	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0291	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0292	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0293	1	0	0	0	0	1	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0294	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0295	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0296	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0297	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0298	1	0	0	0	0	1	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0299	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0300	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0301	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0302	1	0	1	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0303	1	0	1	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0304	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0305	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0306	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0307	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0308	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0309	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0310	1	0	0	0	0	1	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0311	1	0	0	0	0	1	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0312	1	1	0	0	0	0	C1orf159	chr1	1076823	1121089
C1orf159_chr1_1076823_1121089	0/0	g0313	1	0	0	0	0	1	C1orf159	chr1	1076823	1121089
C1orf162_chr1_111468984_111483512	0/1	g0001	144	19	36	62	9	17	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	1/0	g0002	118	13	10	77	1	16	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0003	50	8	6	33	2	1	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0004	33	0	2	27	0	4	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0005	15	0	0	14	0	1	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0006	15	4	10	0	1	0	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0007	15	2	5	1	0	7	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0008	12	12	0	0	0	0	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0009	5	5	0	0	0	0	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0010	4	0	0	4	0	0	C1orf162	chr1	111468984	111483512
C1orf162_chr1_111468984_111483512	0/0	g0011	4	4	0	0	0	0	C1orf162	chr1	111468984	111483512