JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf167_chr1_11757193_11794585	0/0	g0316	1	0	0	1	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0317	1	0	0	1	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0318	1	0	0	1	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0319	1	0	0	1	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0320	1	0	1	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0321	1	0	0	1	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0322	1	0	0	0	0	1	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0323	1	0	1	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0324	1	1	0	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0325	1	0	1	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0326	1	0	0	0	0	1	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0327	1	0	0	0	0	1	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0328	1	0	1	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0329	1	0	1	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0330	1	0	1	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0331	1	0	0	0	0	1	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0332	1	1	0	0	0	0	C1orf167	chr1	11757193	11794585
C1orf167_chr1_11757193_11794585	0/0	g0333	1	1	0	0	0	0	C1orf167	chr1	11757193	11794585
C1orf174_chr1_3884133_3905272	0/0	g0001	57	3	4	45	1	4	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/1	g0002	45	5	5	21	2	11	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0003	30	0	9	21	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0004	19	6	8	5	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0005	14	0	3	11	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0006	12	7	3	0	0	2	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0007	11	10	1	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0008	11	0	6	4	0	1	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0009	9	0	5	0	3	1	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0010	8	0	0	8	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0011	6	6	0	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0012	6	3	1	1	1	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0013	6	0	0	5	1	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0014	5	2	3	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0015	5	0	0	5	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0016	5	0	0	5	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0017	5	5	0	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0018	4	4	0	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0019	4	0	0	4	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0020	4	0	0	4	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0021	3	0	0	3	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0022	3	0	3	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0023	3	3	0	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0024	3	1	1	0	1	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0025	3	3	0	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0026	3	0	0	3	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0027	3	2	0	0	0	1	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0028	3	0	0	0	0	3	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0029	2	0	0	2	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0030	2	2	0	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0031	2	1	1	0	0	0	C1orf174	chr1	3884133	3905272
C1orf174_chr1_3884133_3905272	0/0	g0032	2	1	1	0	0	0	C1orf174	chr1	3884133	3905272